Mind-in-Vitro Open Software

MiV-OS is a free and open-source software project for the post-processing and analysis of mind-in-vitro project.

The software is developed and maintained by the Gazzola Lab at the University of Illinois at Urbana-Champaign. For more information on the projects and what we work on, visit our website.

Contribution

Any contribution to this project is welcome! If you are interested or have any questions, please don’t hesitate to contact us. If you are interested in contributing to this project, we prepared contribution guideline here.

Overview

• About
  • Projects
  • Contribution
• Tutorial
  • Installation
  • Core overview
  • Core quickstart: lazy graphs and your first pipeline
  • Core: built-in data nodes and source loaders
  • Core: pipeline behavior, multiple upstreams, and hooks
  • Core advanced: streaming, cache, and runners
  • Introduction: MiV-OS Pipeline
  • Callback: Customized Plotting
  • Spike Cutout View
  • Build-Your-Own Operator: Spike Sorting
  • MPI Support for Data Loading
• Indices and tables
• How-To Guide
  • Connectivity using Causal Analysis
  • Information Theory
  • Sample Datasets
  • HDF5 Read
  • Read TTL Events in OpenEphys Data
  • Read Raw Binary File
• Indices and tables
• API Documentation
  • Signal Pre-Processing (miv.signal)
  • Spike Detection (miv.signal.spike)
  • Spike Sorting Module (miv.signal.spike)
  • Similarity and Signal Distance (miv.signal.similarity)
  • Statistics Modules (miv.statistics)
  • Causality/Connectivity (miv.statistics.connectivity)
  • Visualization Tools (miv.visualization)
  • Signal Generator (miv.signal.generator)
  • IO Module (miv.io)
  • Core (miv.core)
• Indices and tables
• Discussion
  • Automatic Channel Masking
• Indices and tables

Indices and tables

• Index

• Module Index

• Search Page